The Mel-Boggle-D Brain Atlas for Cortical & Subcortical Parcellation

Description: This is an adaptation of several existing brain parcellations into one cortical and subcortical atlas. It was designed as a bespoke atlas that was placed into a diffusion tractography pipeline. The atlas employs: 1) Cortical parcellations from the CerebrA manual label correction of the Mindboggle-101 atlas (subcortical and ventricular regions removed). Original papers here: https://doi.org/10.1038/s41597-020-0557-9 and here: https://doi.org/10.3389/fnins.2012.00171 2) Subcortical parcellations derived from the Melbourne Subcortex atlas, which uses subcortical functional connectivity gradients to delineate regional boundaries with unprecedented precision and reliability. Original paper here: https://doi.org/10.1038/s41593-020-00711-6 3) Two additional subcortical regions (the subthalamic nucleus and the substantia nigra) derived from the DISTAL atlas. Original paper here: https://doi.org/10.1016/j.neuroimage.2017.05.015 The atlas is in MNI2009c space. It is LPS oriented. The json file text for QSIprep with region indices can be accessed by clicking on the image ID. If you use the atlas please cite the original papers.